Rice Science ›› 2020, Vol. 27 ›› Issue (4): 263-277.DOI: 10.1016/j.rsci.2020.05.003
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Ning Xiao1,2,3,4, Yunyu Wu1,2, Aihong Li1,2,3()
Received:
2019-08-05
Accepted:
2019-12-04
Online:
2020-07-28
Published:
2020-03-31
Ning Xiao, Yunyu Wu, Aihong Li. Strategy for Use of Rice Blast Resistance Genes in Rice Molecular Breeding[J]. Rice Science, 2020, 27(4): 263-277.
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Gene name | Chromosome | Donor | Encoding protein | Reference |
---|---|---|---|---|
Pi37 | 1 | St. No. 1 | NBS-LRR | |
Pit | 1 | K59 | CC-NBS-LRR | |
Pish | 1 | Shin-2 | NBS-LRR | |
Pi35 # | 1 | Hokkai 188 | NBS-LRR | |
Pi64 | 1 | Yangmaogu | NBS-LRR | |
Pib | 2 | Tohoku IL9 | NBS-LRR | |
pi21 # | 4 | Owarihatamochi | Proline-rich metal binding protein | |
Pi63/Pikahei-1(t) # | 4 | Kahei | NBS-LRR | |
Pi-d2 | 6 | Digu | B-lectin receptor kinase | |
Pi9 | 6 | 75-1-127 | NBS-LRR | |
Pi2 | 6 | C101A51 | NBS-LRR | |
Piz-t | 6 | Toride 1 | NBS-LRR | |
Pi-d3 | 6 | Digu | CC-NBS-LRR | |
Pi25 | 6 | Gumei 2 | CC-NBS-LRR | |
Pi50 | 6 | Er-Ba-zhan (EBZ) | NBS-LRR | |
Pigm | 6 | Gumei 4 | NBS-LRR | |
Pid3-I1 | 6 | MC276 | CC-NBS-LRR | |
Pi36 | 8 | Q61 | CC-NBS-LRR | |
Pi5 | 9 | Moroberekan | CC-NBS-LRR | |
Pii | 9 | Hitomebore | NBS-LRR | |
Pikm | 11 | Tsuyuake | NBS-LRR | |
Pb1 # | 11 | Modan | CC-NBS-LRR | |
Pi54 | 11 | Tetep | NBS-LRR | |
Pia | 11 | Aichi Asahi | CC-NBS-LRR | |
Pik-p | 11 | K60 | CC-NBS-LRR | |
Pik | 11 | Kusabue | CC-NBS-LRR | |
Pi1 | 11 | C101LAC | NBS-LRR | |
Pi-CO39 | 11 | CO39 | CC-NBS-LRR | |
Pike | 11 | Xiangzao 143 | NBS-LRR | |
Pi-ta | 12 | Yashiro-mochi | NBS-LRR | |
Ptr | 12 | Katy | Atypical protein with an armadillo repeat |
Table 1 List of cloned blast resistance genes.
Gene name | Chromosome | Donor | Encoding protein | Reference |
---|---|---|---|---|
Pi37 | 1 | St. No. 1 | NBS-LRR | |
Pit | 1 | K59 | CC-NBS-LRR | |
Pish | 1 | Shin-2 | NBS-LRR | |
Pi35 # | 1 | Hokkai 188 | NBS-LRR | |
Pi64 | 1 | Yangmaogu | NBS-LRR | |
Pib | 2 | Tohoku IL9 | NBS-LRR | |
pi21 # | 4 | Owarihatamochi | Proline-rich metal binding protein | |
Pi63/Pikahei-1(t) # | 4 | Kahei | NBS-LRR | |
Pi-d2 | 6 | Digu | B-lectin receptor kinase | |
Pi9 | 6 | 75-1-127 | NBS-LRR | |
Pi2 | 6 | C101A51 | NBS-LRR | |
Piz-t | 6 | Toride 1 | NBS-LRR | |
Pi-d3 | 6 | Digu | CC-NBS-LRR | |
Pi25 | 6 | Gumei 2 | CC-NBS-LRR | |
Pi50 | 6 | Er-Ba-zhan (EBZ) | NBS-LRR | |
Pigm | 6 | Gumei 4 | NBS-LRR | |
Pid3-I1 | 6 | MC276 | CC-NBS-LRR | |
Pi36 | 8 | Q61 | CC-NBS-LRR | |
Pi5 | 9 | Moroberekan | CC-NBS-LRR | |
Pii | 9 | Hitomebore | NBS-LRR | |
Pikm | 11 | Tsuyuake | NBS-LRR | |
Pb1 # | 11 | Modan | CC-NBS-LRR | |
Pi54 | 11 | Tetep | NBS-LRR | |
Pia | 11 | Aichi Asahi | CC-NBS-LRR | |
Pik-p | 11 | K60 | CC-NBS-LRR | |
Pik | 11 | Kusabue | CC-NBS-LRR | |
Pi1 | 11 | C101LAC | NBS-LRR | |
Pi-CO39 | 11 | CO39 | CC-NBS-LRR | |
Pike | 11 | Xiangzao 143 | NBS-LRR | |
Pi-ta | 12 | Yashiro-mochi | NBS-LRR | |
Ptr | 12 | Katy | Atypical protein with an armadillo repeat |
Fig. 1. Comparison of leaf blast and panicle blast resistance among different alleles of Piz locus.A, Resistance reaction to leaf blast and panicle blast of different alleles from the Piz locus japonica rice 07GY31 against the M. oryzae isolate JSBY4-3. B, Resistance reaction to leaf blast and panicle blast of different alleles from the Piz locus in the background of indica rice Yangdao 6 (YD6) against the isolate of M. oryzae (AH3-1). C, Resistance frequency (RF) to leaf blast and panicle blast of different alleles of the Piz locus in the background of japonica rice 07GY31. D, RF to leaf blast and panicle blast of different alleles of the Piz locus in the background of indica rice Yangdao 6. SB, Seedling blast; PB, Panicle blast. Data are Mean ± SD (n = 3). Blast resistant phenotypes were reproduced from Wu et al (2016, 2017).
Target gene | Recipient parent | Chromosome | DNA marker used | Reference |
---|---|---|---|---|
Pi2 | C815S | 6 | RM527 | |
Pigm | Kongyu 131, Longjing 26, Kenjiandao 6 | 6 | M80362 | |
Pigm | KT27S | 6 | G8900 | |
Pi9 | E32 | 6 | Ins2-3 | |
Pi9 | R288 | 6 | Clon2-1 | |
Pi9 | Q211S | 6 | Nbs21 | |
Pi40 | Osmancik-97, Halilbey | 6 | 9871.T7E2b | |
Pi1 | BPT5204 | 11 | RM224 | |
Pi54 | BPT5204 | 11 | Pi-54MAS | |
Pi54 | R1, R2 | 11 | RM224 | |
Pi1/Pi2 | GD-7S | 6, 11 | RM144, AP22 | |
Pi1/Pi2 | Pusa RH-10 | 6, 11 | RM5926, AP5659-5 | |
Pi1/Pi2, Pi1/Pigm | GZ63S, 97S, R084, R609 | 6, 11 | RM224, ZJ58.7, AP22 | |
Pi9/Pi-ta | Pusa Basmati 1 | 6, 12 | AP5659-5, YL155/YL87//YL155/87 | |
Pi46/Pi-ta | Hanghui 179 | 11, 12 | RM224, YL155/YL87//YL155/87 | |
Pib/Pik | K6415 | 2, 11 | NSb, K6415 | Hayashi et al, 2006 |
Pib/Pi54 | MR219 | 2, 11 | RM208, RM206 | |
Pi2/Pi54 | PB1121 | 6, 11 | AP5659-5, RM206 | |
Pi2/Pi54 | PRR78 | 6, 11 | AP5930, RM206 | |
Piz-t/Pi54, Pi9/Pi54 | 07GY31 | 6, 11 | Z4794, Pikh-1 | |
Pi1/Pi2/Pi33 | Kuboyar | 6, 8, 11 | RM224, RM527, RM310 | |
Pi1/Pi2/Pi33 | ADT43 | 6, 8, 11 | RM224, RM527, RM25 | |
Pi1/Pi2/D12 | Jin 23B | 6, 11, 12 | RM144/RM224, PI2-4/HC28, RM277/RM309 | |
Pi1/Pi54/Pi-ta | Mushk Budji | 11, 12, 12 | Pi54MAS, RM224, YL155/YL87//YL155/87 |
Table 2 Successful examples of application of broad-spectrum resistance genes in rice breeding practice.
Target gene | Recipient parent | Chromosome | DNA marker used | Reference |
---|---|---|---|---|
Pi2 | C815S | 6 | RM527 | |
Pigm | Kongyu 131, Longjing 26, Kenjiandao 6 | 6 | M80362 | |
Pigm | KT27S | 6 | G8900 | |
Pi9 | E32 | 6 | Ins2-3 | |
Pi9 | R288 | 6 | Clon2-1 | |
Pi9 | Q211S | 6 | Nbs21 | |
Pi40 | Osmancik-97, Halilbey | 6 | 9871.T7E2b | |
Pi1 | BPT5204 | 11 | RM224 | |
Pi54 | BPT5204 | 11 | Pi-54MAS | |
Pi54 | R1, R2 | 11 | RM224 | |
Pi1/Pi2 | GD-7S | 6, 11 | RM144, AP22 | |
Pi1/Pi2 | Pusa RH-10 | 6, 11 | RM5926, AP5659-5 | |
Pi1/Pi2, Pi1/Pigm | GZ63S, 97S, R084, R609 | 6, 11 | RM224, ZJ58.7, AP22 | |
Pi9/Pi-ta | Pusa Basmati 1 | 6, 12 | AP5659-5, YL155/YL87//YL155/87 | |
Pi46/Pi-ta | Hanghui 179 | 11, 12 | RM224, YL155/YL87//YL155/87 | |
Pib/Pik | K6415 | 2, 11 | NSb, K6415 | Hayashi et al, 2006 |
Pib/Pi54 | MR219 | 2, 11 | RM208, RM206 | |
Pi2/Pi54 | PB1121 | 6, 11 | AP5659-5, RM206 | |
Pi2/Pi54 | PRR78 | 6, 11 | AP5930, RM206 | |
Piz-t/Pi54, Pi9/Pi54 | 07GY31 | 6, 11 | Z4794, Pikh-1 | |
Pi1/Pi2/Pi33 | Kuboyar | 6, 8, 11 | RM224, RM527, RM310 | |
Pi1/Pi2/Pi33 | ADT43 | 6, 8, 11 | RM224, RM527, RM25 | |
Pi1/Pi2/D12 | Jin 23B | 6, 11, 12 | RM144/RM224, PI2-4/HC28, RM277/RM309 | |
Pi1/Pi54/Pi-ta | Mushk Budji | 11, 12, 12 | Pi54MAS, RM224, YL155/YL87//YL155/87 |
Fig. 2. Creation of core resistant germplasm R9311 and its breeding application.A, Resistance comparison of leaf blast and panicle blast between R9311 and Yangdao 6 (YD6). Data are Mean ± SD (n = 3). **, P < 0.001. SB, Seedling blast; PB, Panicle blast; RF, Resistance frequency. B, Panicle blast resistance reaction of R9311 and YD6 in the natural blast nursery. C, Schematic diagram of the construction of the sterile lines and hybrids based on the core germplasm of R9311. D, Field performances of new breed hybrid rice.
Fig. 3. Molecular breeding strategies using rice blast resistance genes.A, Breeding strategies for improving blast resistance in the previous studies. B, Breeding strategies that have been used. C, Novel breeding strategies that can be utilized in further research.
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